Open Specy



OVERVIEW


More than 350 people have used Open Specy to analyze, share, process, and identify their Raman and IR spectra.



Instructions


To use the tool upload a csv file to the upload file tab. The file needs to be a csv with one column named -Wavelength- (in units of 1/cm) and another named -Absorbance-. You can smooth your data using an SG filter, baseline correct your data using the polynomial order of iModPolyFit, and restrict the wavelength range for the match. The result will be compared to an internal Raman or FTIR spectra library. The strongest 100 matches along with your uploaded or processed data will be presented in an interactive plot and table.



About the reference spectra


Reference spectra was sourced from open access resources online, peer reviewed publications, and corporate donations. In the future, spectra that is uploaded to the tool will be incorporated to the reference library to make it even better.



Contribute spectra


To share spectra upload a file to the upload file tab. If you selected Share a copy of your spectra will be sent to the Community Data Warehouse on Open Science Framework. To add additional metadata, fill in the avaliable metadata fields on the right hand side and click -Share Data-. The spectra file that you uploaded along with your responses will be copied to the a -With Metadata- subfolder at the link below. All shared data holds a Creative Commons Attribution-NonCommercial License 4.0.



Contribute time


We are looking for coders, moderators, spectroscopy experts, microplastic researchers, industry, government, and others to join the Open Specy team. Please contact Win at wincowger@gmail.com



Contribute financially


Want to sustain this project with financial kindness?



Stay up to date!


Email wincowger@gmail.com to be added to the mailing list.



Citation


W. Cowger, A. Gray, H. Hapich, C. Rochman, J. Lynch, S. Primpke, O. Herodotou. 2020. Open Specy. www.openspecy.org




Terms And Conditions


1. Who May Use the Services
You may use the Services only if you agree to form a binding contract with Open Specy by accepting these Terms. If you are accepting these Terms and using the Services on behalf of a company, organization, government, or other legal entity, you represent and warrant that you are authorized to do so and have the authority to bind such entity to these Terms, in which case the words “you” and “your” as used in these Terms shall refer to such entity.

2. Content on the Services
You are responsible for your use of the Services and for any Content you provide, including compliance with applicable laws, rules, and regulations. You should only provide Content that you are comfortable sharing with others.

Any use or reliance on any Content or materials posted via the Services or obtained by you through the Services is at your own risk. We do not endorse, support, represent or guarantee the completeness, truthfulness, accuracy, or reliability of any Content or communications posted via the Services. You understand that by using the Services, you may be exposed to Content that might be offensive, harmful, inaccurate or otherwise inappropriate, or in some cases, postings that have been mislabeled or are otherwise deceptive. All Content is the sole responsibility of the person who originated such Content. We may not monitor or control the Content posted via the Services and, we cannot take responsibility for such Content.

We reserve the right to remove Content that violates the User Agreement, including for example, copyright or trademark violations or other intellectual property misappropriation, impersonation, unlawful conduct, or harassment. Information regarding specific policies and the process for reporting or appealing violations can be found by emailing Win at wincowger@gmail.com.

If you believe that your Content has been copied in a way that constitutes copyright infringement, please report this by emailing Win at wincowger@gmail.com.

3. Your Rights and Grant of Rights in the Content
You retain your rights to any Content you submit, post or display on or through the Services. What’s yours is yours — you own your Content (and your incorporated audio, photos and videos are considered part of the Content).

By submitting, posting or displaying Content on or through the Services, you grant us a worldwide, non-exclusive, royalty-free license (with the right to sublicense) to use, copy, reproduce, process, adapt, modify, publish, transmit, display and distribute such Content in any and all media or distribution methods now known or later developed (for clarity, these rights include, for example, curating, transforming, and translating). This license authorizes us to make your Content available to the rest of the world and to let others do the same. You agree that this license includes the right for Open Specy to provide, promote, and improve the Services and to make Content submitted to or through the Services available to other companies, organizations or individuals for the syndication, broadcast, distribution, Retweet, promotion or publication of such Content on other media and services, subject to our terms and conditions for such Content use. Such additional uses by Open Specy, or other companies, organizations or individuals, is made with no compensation paid to you with respect to the Content that you submit, post, transmit or otherwise make available through the Services as the use of the Services by you is hereby agreed as being sufficient compensation for the Content and grant of rights herein.

You understand that we may modify or adapt your Content as it is distributed, syndicated, published, or broadcast by us and our partners and/or make changes to your Content in order to adapt the Content to different media.

You represent and warrant that you have, or have obtained, all rights, licenses, consents, permissions, power and/or authority necessary to grant the rights granted herein for any Content that you submit, post or display on or through the Services. You agree that such Content will not contain material subject to copyright or other proprietary rights, unless you have necessary permission or are otherwise legally entitled to post the material and to grant Open Specy the license described above.

 
4. Using the Services

Our Services evolve constantly. As such, the Services may change from time to time, at our discretion. We may stop (permanently or temporarily) providing the Services or any features within the Services to you or to users generally. We also retain the right to create limits on use and storage at our sole discretion at any time. We may also remove or refuse to distribute any Content on the Services, limit distribution or visibility of any Content on the service.

In consideration for Open Specy granting you access to and use of the Services, you agree that Open Specy and its third-party providers and partners may place advertising on the Services or in connection with the display of Content or information from the Services whether submitted by you or others. You also agree not to misuse our Services, for example, by interfering with them. You may not do any of the following while accessing or using the Services: (i) access, tamper with, or use non-public areas of the Services, Open Specy’s computer systems, or the technical delivery systems of Open Specy’s providers; (ii) probe, scan, or test the vulnerability of any system or network or breach or circumvent any security or authentication measures; (iii) access or search or attempt to access or search the Services by any means (automated or otherwise) other than through our currently available, published interfaces that are provided by Open Specy (and only pursuant to the applicable terms and conditions), unless you have been specifically allowed to do so in a separate agreement with Open Specy; (iv) forge any TCP/IP packet header or any part of the header information in any email or posting, or in any way use the Services to send altered, deceptive or false source-identifying information; or (v) interfere with, or disrupt, (or attempt to do so), the access of any user, host or network, including, without limitation, sending a virus, overloading, flooding, spamming, mail-bombing the Services, or by scripting the creation of Content in such a manner as to interfere with or create an undue burden on the Services. We also reserve the right to access, read, preserve, and disclose any information as we reasonably believe is necessary to (i) satisfy any applicable law, regulation, legal process or governmental request, (ii) enforce the Terms, including investigation of potential violations hereof, (iii) detect, prevent, or otherwise address fraud, security or technical issues, (iv) respond to user support requests, or (v) protect the rights, property or safety of Open Specy, its users and the public. Open Specy does not disclose personally-identifying information to third parties except in accordance with our Privacy Policy.

Your Account
You may need to create an account to use some of our Services. You are responsible for safeguarding your account, so use a strong password and limit its use to this account. We cannot and will not be liable for any loss or damage arising from your failure to comply with the above.
You can control most communications from the Services. We may need to provide you with certain communications, such as service announcements and administrative messages. These communications are considered part of the Services and your account, and you may not be able to opt-out from receiving them. 
 
Your License to Use the Services
Open Specy gives you a personal, worldwide, royalty-free, non-assignable and non-exclusive license to use the software provided to you as part of the Services. This license has the sole purpose of enabling you to use and enjoy the benefit of the Services as provided by Open Specy, in the manner permitted by these Terms.
The Services are protected by copyright, trademark, and other laws of both the United States and other countries. Nothing in the Terms gives you a right to use the Open Specy name or any of the Open Specy trademarks, logos, domain names, other distinctive brand features, and other proprietary rights. All right, title, and interest in and to the Services (excluding Content provided by users) are and will remain the exclusive property of Open Specy and its licensors. Any feedback, comments, or suggestions you may provide regarding Open Specy, or the Services is entirely voluntary and we will be free to use such feedback, comments or suggestions as we see fit and without any obligation to you.
 
Ending These Terms
You may end your legal agreement with Open Specy at any time by deactivating your accounts and discontinuing your use of the Services. 
 
5. Limitations of Liability
By using the Services you agree that Open Specy, its parents, affiliates, related companies, officers, directors, employees, agents representatives, partners and licensors, liability is limited to the maximum extent permissible in your country of residence.
 
6. General
We may revise these Terms from time to time. The changes will not be retroactive, and the most current version of the Terms, will govern our relationship with you. By continuing to access or use the Services after those revisions become effective, you agree to be bound by the revised Terms.

In the event that any provision of these Terms is held to be invalid or unenforceable, then that provision will be limited or eliminated to the minimum extent necessary, and the remaining provisions of these Terms will remain in full force and effect. Open Specy’s failure to enforce any right or provision of these Terms will not be deemed a waiver of such right or provision.

These Terms are an agreement between you and Open Specy. If you have any questions about these Terms, please contact us.


Privacy Policy


Log Data
We receive information when you view content on or otherwise interact with our services, which we refer to as “Log Data,” even if you have not created an account. For example, when you visit our websites, sign into our services, interact with our email notifications, or visit a third-party service that includes Open Specy content, we may receive information. This Log Data includes information such as your IP address, browser type, operating system, the referring web page, pages visited, location, your mobile carrier, device information (including device and application IDs), search terms (including those not submitted as queries), and cookie information. We also receive Log Data when you click on, view, or interact with links and buttons on our services, including when you install another application through Open Specy. We use Log Data to operate our services and ensure their secure, reliable, and robust performance. For example, we use Log Data to protect the security of accounts and to determine what content is popular on our services. We also use this data to improve the functionality of the tools on the site, the content we show you, including ads and to improve the effectiveness of our own marketing.

Non-Personal Information
We share or disclose non-personal data, such as aggregated information like the total number of times people visited the site, the number of people who clicked on a particular link, some inferred interests, or reports to advertisers about how many people saw or clicked on their ads.

Upload. View and Share Spectra Files

Example Dataset (HDPE,Raman)

Share Additional Metadata on Uploaded Spectrum.


Citation: W. Cowger, A. Gray, H. Hapich, C. Rochman, J. Lynch, S. Primpke, O. Herodotou. 2020. Open Specy. www.openspecy.org

Smooth, Baseline Correct, and Download Processed Spectra

Download (recommended)

Citation: W. Cowger, A. Gray, H. Hapich, C. Rochman, J. Lynch, S. Primpke, O. Herodotou. 2020. Open Specy. www.openspecy.org

Identify Spectrum Using the Reference Library


Citation: W. Cowger, A. Gray, H. Hapich, C. Rochman, J. Lynch, S. Primpke, O. Herodotou. 2020. Open Specy. www.openspecy.org